Packages

edu.cornell.med.icb.allen.xml
edu.cornell.med.icb.allen.xml.descriptors
edu.cornell.med.icb.allen.xml.types
edu.cornell.med.icb.allen.xml.types.descriptors
edu.cornell.med.icb.stat
edu.cornell.med.icb.tissueinfo.annotations
edu.cornell.med.icb.tissueinfo.owl	Provides support for exporting the ontologies in the OWL format.
edu.cornell.med.icb.tissueinfo.similarity	Tools to calculate tissue expression profile similarity.
edu.cornell.med.icb.tissueinfo.similarity.clustering
edu.cornell.med.icb.tissueinfo.similarity.preprocessors
edu.cornell.med.icb.tissueinfo.similarity.scorers
edu.cornell.med.icb.tools
edu.mssm.crover.db
edu.mssm.crover.db.relational	Provides configuration and connection pool for a relational database through JDBC.
edu.mssm.crover.imports	Provides for the import of sequences from files.
edu.mssm.crover.representation	Provides for the representation of biological objects.
edu.mssm.crover.tables	Provides for table data structures, algorithms, readers and writers.
edu.mssm.crover.tables.readers	Provides table readers.
edu.mssm.crover.tables.treatments	Provides table treatments.
edu.mssm.crover.tables.writers	Provides table writers.
edu.mssm.crover.tools	Provides API to access bioinformatics tools.
edu.mssm.crover.tools.blast	Provides an API to access BLAST from Java.
edu.mssm.crover.tools.blast.parsers	Provides parsers for the XML version of the BLAST oupput.
edu.mssm.crover.tools.blast.parsers.xml.v3
edu.mssm.crover.tools.blast.parsers.xml.v3.descriptors
edu.mssm.crover.tools.tissue	TissueInfo command line tools and classes.
edu.mssm.crover.tools.tissue.hierarchy	Default hierarchy of tissue developed for TissueInfo.
edu.mssm.crover.tools.tissue.plugins	TissueInfo plugins.
edu.mssm.crover.tools.tissue.xml
edu.mssm.crover.tools.tissue.xml.descriptors
edu.mssm.crover.util	Provides various tools and APIs.
gominer