edu.mssm.crover.tools.blast
Class BlastResult

java.lang.Object
  edu.mssm.crover.tools.blast.BlastResult

public class BlastResult
extends Object

Encapsulates different versions of BlastOutput.

Constructor Summary

BlastResult()

Method Summary

Object	getBlastOutput() Obtains a reference to a BlastOutput instance.
int	getVersion() Returns the version of BlastOutput contained in this BlastResult.
protected void	setBlastOutput(Object blastOutput)
protected void	setVersion(int version) Sets the version of BlastOutput contained in this BlastResult.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BlastResult

public BlastResult()

Method Detail

getVersion

public int getVersion()

Returns the version of BlastOutput contained in this BlastResult.

setVersion

protected void setVersion(int version)

Sets the version of BlastOutput contained in this BlastResult.

getBlastOutput

public Object getBlastOutput()

Obtains a reference to a BlastOutput instance. The exact type of the instance depends on the version number (see getVersion). BlastOutput types are stored in different packages, the name of which depends on the version number. A common interface between different versions of BlastOutput cannot be assumed. The caller determines the version number and accordingly must cast the object reference to the BlastOutput reference.

setBlastOutput

protected void setBlastOutput(Object blastOutput)