Package edu.mssm.crover.tables.readers

Provides table readers.

See:
Description

Interface Summary

TableReader

Interface to read table data from different file formats.

Class Summary

AffymetrixTxtFormatReader	User: campagne Date: Sep 16, 2005 Time: 2:17:19 PM
CologneReader	original file:
ColumbiaTmmReader
CSVReader
DSSPTableReader	Reads a DSSP (W.
GeoDataSetReader	Reads a Gene Expression Omnibus GEO dataset.
GeoPlatformFileReader	User: campagne Date: Sep 16, 2005 Time: 2:17:19 PM
IconixReader	original file:
LocusLinkFilter
LocusLinkTableReader	Reads LocusLink LL.out ascii table format.
MinesetTableReader	Reads SGI's MineSet ASCII table format.
SVMLightReader	Reads a table in the SVMLight format.
TabTokenizer	Splits strings in tab-separated tokens.
TIWebMinesetReader	Reads SGI's MineSet ascii table format.
WhiteheadResReader

Exception Summary

SyntaxErrorException	Thrown when a syntax error is encountered while reading the schema or data file of a table representation.
UnsupportedFormatException	Thrown when the format of the schema or data cannot be recognized by the reader.

Package edu.mssm.crover.tables.readers Description

Provides table readers. Readers read tabular data represented in a given file format and produce an instance of table.

Package Specification

See the sub-packages for a list of available tools.

Related Documentation