edu.cornell.med.icb.tissueinfo.similarity.scorers
Class BaselineNormalizedConfidenceScorer

java.lang.Object
  edu.cornell.med.icb.tissueinfo.similarity.scorers.BaselineNormalizedConfidenceScorer

All Implemented Interfaces:

ExpressionProfileSimilarityScorer

public class BaselineNormalizedConfidenceScorer
extends Object
implements ExpressionProfileSimilarityScorer

Confidence scorer normalized with BaselineNormalizedScorer.

Author:

Fabien Campagne Date: Jul 10, 2007 Time: 7:18:44 PM

Constructor Summary

BaselineNormalizedConfidenceScorer()

Method Summary

double	score(int[] queryCounts, int[] targetCounts, int[] globalTissueRepresentationCounts)
double	score(int[] queryCounts, int[] targetCounts, int[] globalTissueRepresentationCounts, float[] tissueWeights)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BaselineNormalizedConfidenceScorer

public BaselineNormalizedConfidenceScorer()

Method Detail

score

public final double score(int[] queryCounts,
                          int[] targetCounts,
                          int[] globalTissueRepresentationCounts)

Specified by:

score in interface ExpressionProfileSimilarityScorer

score

public final double score(int[] queryCounts,
                          int[] targetCounts,
                          int[] globalTissueRepresentationCounts,
                          float[] tissueWeights)

Specified by:

score in interface ExpressionProfileSimilarityScorer