Package edu.mssm.crover.ims.tasks.engines

Provides task engines.

See:
          Description

Class Summary
FailTaskEngine  
FileContentTaskData Stores the contents of a file as a byte array.
FileTaskData Stores the name of a file.
MaskSequenceTaskData Stores the taskid of a megablast task, for use with the TIMegablastTaskEngine.
MaskSequenceTaskEngine This engine masks FASTA sequences from a file using the scylla command.
MegablastTaskData Stores the parameters for a megablast task, for use with the MegablastTaskEngine.
MegablastTaskEngine This engine performs a MegaBLAST operation on the FileTaskData (which contains sequence(s)).
NilEngine  
RobustParallelTaskEngine  
SequenceTaskData Stores FASTA format sequences.
SleepTaskEngine  
SumSometimeTaskEngine This engine computes the sum of the values in an array of integers.
SumTaskData Minimal example of TaskData implementation.
SumTaskEngine This engine computes the sum of the values in an array of integers.
 

Package edu.mssm.crover.ims.tasks.engines Description

Provides task engines.

Package Specification

See the sub-packages for a list of available tools.

Related Documentation



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